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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811270.1_cds_XP_016496659.1_10858
CDS Infomation

[gene=LOC107815563] [db_xref=GeneID:107815563] [protein=E3 ubiquitin-protein ligase AIP2-like] [protein_id=XP_016496659.1] [location=complement(join(21218..21367,21478..21693,22098..22300,22413..22644,24415..24570))] [gbkey=CDS]
Sequence

ATGGAGAGGCGTCAGACTGAGGAAGAATTGAAGCAGAAGCTTCAAGAATTGCAGAAGCAG
TTAGGAAAGAAACAAATATTTGAGGAAGCTGTTTCCTCTATCCGACCCCTTCTTCTTCAA
TACTATCCTTCTGCTTCCCCTTCTCTTCGTCATTCGTTCTATACGGTTGTATGCCGGGTT
GCCACCATTTTAAAGACAAGATACACAATGCCTGGATTCTGGAATGCCGGGCTTCGGTTA
TTCCTTGAGGCTGAGCACCTGGTGTCAGAGTCTTCTGAAAAGAAACATTTGCAAAGTTGC
ATTAGTCAGGCACGAGAGCAGTTAGCTGAAGTACAGAATGAATCTCAGAATACAACAGCT
ACAGAAAATGGCTCAAATAGAAGTGCTGGATACCTTTTTGAGGGGCATCTAACTGTTGAC
CCTGAGCCTGAGCAGCCTGGTTGGCTTGTACAGTCTAATCTTCTCACTGCTGCTGCAACA
CTGTTTGCTGGTGAATCCTCTGAAGGTCATTTAGCCAGTGCTGACGCTTCAGAAGGTGCT
CGCAACGTACTTGAGGAGCTGGTTGCTAGACTAGATAATATAATCCCAGAGATACTGGAC
GATGGTCTTGCTGCCCCGAGAGCACCACCTGCCAGTAAAGAAGTTGTGGCAAACCTCCCA
GTTACTACAGTCACAGATGAGTTCTTGACGAAGATGGGTGCAGATGCGGAATGTGCAATT
TGCAGGGAAGTGTTAGTTGTAGATGACAAGATGCAAGAGTTGCCCTGCAAGCATATGTTT
CACCCTCCTTGCCTGAAGCCATGGCTGGATGAGCACAATTCTTGTCCAATTTGTCGGCAT
GAGTTGCTCACAGATGATCATCACTATGAAAGCTGGAAGGAGCGTGAAAAGGAAGCAGAG
GAAGAAAGAAAAGGAGCTGCTAATGCAGTTCGTGAGGGTGAATACATGTATGTATAA

Peptide Sequence

PEP ID

XP_016496659.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Nicotiana tabacum]
Sequence

MERRQTEEELKQKLQELQKQLGKKQIFEEAVSSIRPLLLQYYPSASPSLRHSFYTVVCRV
ATILKTRYTMPGFWNAGLRLFLEAEHLVSESSEKKHLQSCISQAREQLAEVQNESQNTTA
TENGSNRSAGYLFEGHLTVDPEPEQPGWLVQSNLLTAAATLFAGESSEGHLASADASEGA
RNVLEELVARLDNIIPEILDDGLAAPRAPPASKEVVANLPVTTVTDEFLTKMGADAECAI
CREVLVVDDKMQELPCKHMFHPPCLKPWLDEHNSCPICRHELLTDDHHYESWKEREKEAE
EERKGAANAVREGEYMYV

Transcript Sequence

Gene sequence data has not been registered.